C; An alignment in the PIR format

>P1;pdb4jbs_A.ent
structure:pdb4jbs_A.ent: 54  : A : 961  :  : : : :
PVATNGERFPWQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEYMKPGKELKVLSYPAHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFD----------------EPLFKANFSIKIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYAS---PDKRNQTHYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSS-----------------------------ASDKLWVTRVIAHELAHQWFGNLVTMEWWNDI------------WLKEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLN------SSRPISKPAETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSLGENAEVKEMMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGQERYLWH----------IPLTYSTSSSNVIHRHILKSKTDTLDLPEKTS--WVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLT---------------LDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWSDKGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKL-NIPTDVLKIVYSVGAQTTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELGMEGK-VIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGS----YDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQGSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR*

>P1;pcons23540.4JBS_A.pgenthreader.10
sequence:pcons23540.4JBS_A.pgenthreader.10: . : . : . : : : : :
-----------------------------------------------------------------------------------------------------------------------------------------------------------DEAREAAAVRALVARLLGPGPAADFSVSVERA-----------------------------LAAKPGLDTYSLGG--------GGAARVRVRGSTGVAAAAGLHRYLRDFCGCHVAWSGSQLRLPRPLP-------AVPGELTEATPNRYRYYQNVCTQSYSFVWWDWARWEREIDWMALNGINLALAWSGQEAIWQRVYLALGLTQAEINEFFTGPAFLAWGRMGNLHTWDGPLPPSWHIKQLYLQHRVLDQMRSFGMTPVLPAFAGHVPEAVTRVFPQVNVTKMGSWGHFNCSYSCSFLLAPEDPIFPIIGSLFLRELIKEFGTDHIYGADTFNEMQPPS--SEPSYLAAATTA----------VYEAMTAVDT---------EA--VWLLQGWLFQHQPQFWGPAQIRAVLGAVP----------------RGRLLVLDLFAESQPVYTRTASFQGQPFIWCMLHN--------FGGNHGLFGALEAVNGGPEAARLFPNSTMVGTGMAPEGISQNEVVYSLMAELGWRKDPVPD------LAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYNCSGEACRGHNRSPLVRRPSLQMNTSIWYNR------SDVFEAWRLLLTSAPSLATSPAFRYDLLDLTRQAVQELVSLYYEEARSAYLSKELASLLRAGGV--LAYELLPALDEVLASDSRFLLGSWLEQARAAAVS----EAEADFYEQNSRYQLTLWGPEGNILDYANKQLAGLVANYY-----TPRWRLFLEAL---------VDSVAQGIPFQQHQFDKNVFQLEQAFVLSKQ*